Ari Zeida

Affiliations

Departamento de Bioquímica, Facultad de Medicina, Center for Free Radical and Biomedical Research, Universidad de la República, Montevideo, Uruguay.

Publications (26)

Gating in plant plasma membrane aquaporins: the involvement of leucine in the formation of a pore constriction in the closed state.

The FEBS journal

Avec: Agustina Canessa Fortuna , Gerardo Zerbetto De Palma , Lucio Aliperti Car , Luciano Armentia , Victoria Vitali , Ari Zeida , Darío A Estrin , Karina Alleva

Akt Is S-Palmitoylated: A New Layer of Regulation for Akt.

Frontiers in cell and developmental biology

Avec: Matías Blaustein , Estefanía Piegari , Camila Martínez Calejman , Antonella Vila , Analía Amante , María Victoria Manese , Ari Zeida , Laurence Abrami , Mariela Veggetti , David A Guertin , F Gisou van der Goot , María Martha Corvi , Alejandro Colman-Lerner

Cardiolipin interactions with cytochrome c increase tyrosine nitration yields and site-specificity.

Archives of biochemistry and biophysics

Avec: Verónica Demicheli , Florencia Tomasina , Santiago Sastre , Ari Zeida , Verónica Tórtora , Analía Lima , Carlos Batthyány , Rafael Radi

Revisiting the role of 3-nitrotyrosine residues in the formation of alpha-synuclein oligomers and fibrils.

Archives of biochemistry and biophysics

Avec: Cecilia Chavarría , Rodrigo Ivagnes , Ari Zeida , María Dolores Piñeyro , José M Souza

Acidity and nucleophilic reactivity of glutathione persulfide.

The Journal of biological chemistry

Avec: Dayana Benchoam , Jonathan A Semelak , Ernesto Cuevasanta , Mauricio Mastrogiovanni , Juan S Grassano , Gerardo Ferrer-Sueta , Ari Zeida , Madia Trujillo , Matías N Möller , Darío A Estrin , Beatriz Alvarez

Kinetics of formation and reactivity of the persulfide in the one-cysteine peroxiredoxin from

The Journal of biological chemistry

Avec: Ernesto Cuevasanta , Aníbal M Reyes , Ari Zeida , Mauricio Mastrogiovanni , María Inés De Armas , Rafael Radi , Beatriz Alvarez , Madia Trujillo

From quantum to subcellular scales: multi-scale simulation approaches and the SIRAH force field.

Interface focus

Avec: Matías R Machado , Ari Zeida , Leonardo Darré , Sergio Pantano

Mitochondrial Peroxiredoxin 3 Is Rapidly Oxidized and Hyperoxidized by Fatty Acid Hydroperoxides.

Antioxidants (Basel, Switzerland)

Avec: Giuliana Cardozo , Mauricio Mastrogiovanni , Ari Zeida , Nicolás Viera , Rafael Radi , Aníbal M Reyes , Madia Trujillo

Multiscale Modeling of Thiol Overoxidation in Peroxiredoxins by Hydrogen Peroxide.

Journal of chemical information and modeling

Avec: J A Semelak , F Battistini , R Radi , M Trujillo , A Zeida , D A Estrin

A computational investigation of the reactions of tyrosyl, tryptophanyl, and cysteinyl radicals with nitric oxide and molecular oxygen.

Free radical research

Avec: Federico N Pedron , Silvina Bartesaghi , Darío A Estrin , Rafael Radi , Ari Zeida

Genetic and transcriptomic evidences suggest ARO10 genes are involved in benzenoid biosynthesis by yeast.

Yeast (Chichester, England)

Avec: Maria Jose Valera , Ari Zeida , Eduardo Boido , Gemma Beltran , María Jesús Torija , Albert Mas , Rafael Radi , Eduardo Dellacassa , Francisco Carrau

PIP aquaporin pH-sensing is regulated by the length and charge of the C-terminal region.

The FEBS journal

Avec: Florencia Scochera , Gerardo Zerbetto De Palma , Agustina Canessa Fortuna , Jonathan Chevriau , Roxana Toriano , Gabriela Soto , Ari Zeida , Karina Alleva

Kinetic and structural assessment of the reduction of human 2-Cys peroxiredoxins by thioredoxins.

The FEBS journal

Avec: Sebastián F Villar , Laura Corrales-González , Belén Márquez de Los Santos , Joaquín Dalla Rizza , Ari Zeida , Ana Denicola , Gerardo Ferrer-Sueta

Mechanisms and consequences of protein cysteine oxidation: the role of the initial short-lived intermediates.

Essays in biochemistry

Avec: Lucia Turell , Ari Zeida , Madia Trujillo

Catalysis of Peroxide Reduction by Fast Reacting Protein Thiols.

Chemical reviews

Avec: Ari Zeida , Madia Trujillo , Gerardo Ferrer-Sueta , Ana Denicola , Darío A Estrin , Rafael Radi

Thiol-based chemical probes exhibit antiviral activity against SARS-CoV-2 via allosteric disulfide disruption in the spike glycoprotein.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Yunlong Shi , Ari Zeida , Caitlin E Edwards , Michael L Mallory , Santiago Sastre , Matías R Machado , Raymond J Pickles , Ling Fu , Keke Liu , Jing Yang , Ralph S Baric , Richard C Boucher , Rafael Radi , Kate S Carroll

Catalytic Mechanism of

Biochemistry

Avec: Santiago Sastre , Bruno Manta , Jonathan A Semelak , Dario Estrin , Madia Trujillo , Rafael Radi , Ari Zeida

Novel Lennard-Jones Parameters for Cysteine and Selenocysteine in the AMBER Force Field.

Journal of chemical information and modeling

Avec: Federico N Pedron , Andresa Messias , Ari Zeida , Adrián E Roitberg , Darío A Estrin

Minimum Free Energy Pathways of Reactive Processes with Nudged Elastic Bands.

Journal of chemical theory and computation

Avec: Jonathan A Semelak , Ari Zeida , Nicolás O Foglia , Darío A Estrin

Permeation mechanisms of hydrogen peroxide and water through Plasma membrane Intrinsic Protein (PIP) aquaporins.

The Biochemical journal

Avec: Jonathan Chevriau , Gerardo Zerbetto De Palma , Cintia Jozefkowicz , Victoria Vitali , Agustina Canessa Fortuna , Nicolás Ayub , Gabriela Soto , Gerd Patrick Bienert , Ari Zeida , Karina Edith Alleva

Exploring the conformational transition between the fully folded and locally unfolded substates of Escherichia coli thiol peroxidase.

Physical chemistry chemical physics : PCCP

Avec: Diego S Vazquez , Ari Zeida , William A Agudelo , Mónica R Montes , Gerardo Ferrer-Sueta , Javier Santos

The superoxide radical switch in the biology of nitric oxide and peroxynitrite.

Physiological reviews

Avec: Lucía Piacenza , Ari Zeida , Madia Trujillo , Rafael Radi

Redox sensitive human mitochondrial aconitase and its interaction with frataxin: In vitro and in silico studies confirm that it takes two to tango.

Free radical biology & medicine

Avec: Santiago Mansilla , Verónica Tórtora , Florencia Pignataro , Santiago Sastre , Ignacio Castro , Ma Laura Chiribao , Carlos Robello , Ari Zeida , Javier Santos , Laura Castro

Possible molecular basis of the biochemical effects of cysteine-derived persulfides.

Frontiers in molecular biosciences

Avec: Ernesto Cuevasanta , Dayana Benchoam , Jonathan A Semelak , Matías N Möller , Ari Zeida , Madia Trujillo , Beatriz Alvarez , Darío A Estrin

Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.

The Journal of biological chemistry

Avec: Samuel L Freeman , Vera Skafar , Hanna Kwon , Alistair J Fielding , Peter C E Moody , Alejandra Martínez , Federico M Issoglio , Lucas Inchausti , Pablo Smircich , Ari Zeida , Lucía Piacenza , Rafael Radi , Emma L Raven

De novo sequencing and construction of a unique antibody for the recognition of alternative conformations of cytochrome

Proceedings of the National Academy of Sciences of the United States of America

Avec: Florencia Tomasina , Jennyfer Martínez , Ari Zeida , María Laura Chiribao , Verónica Demicheli , Agustín Correa , Celia Quijano , Laura Castro , Robert H Carnahan , Paige Vinson , Matt Goff , Tracy Cooper , W Hayes McDonald , Natalie Castellana , Luciana Hannibal , Paul T Morse , Junmei Wan , Maik Hüttemann , Ronald Jemmerson , Lucía Piacenza , Rafael Radi

Réseau de co-auteurs

Rafael Radi 11 collaborations

Madia Trujillo 8 collaborations

Darío A Estrin 7 collaborations

Santiago Sastre 4 collaborations

Jonathan A Semelak 4 collaborations

Gerardo Ferrer-Sueta 4 collaborations

Agustina Canessa Fortuna 3 collaborations

Gerardo Zerbetto De Palma 3 collaborations

Ernesto Cuevasanta 3 collaborations

Mauricio Mastrogiovanni 3 collaborations

Beatriz Alvarez 3 collaborations

Lucía Piacenza 3 collaborations

Victoria Vitali 2 collaborations

Karina Alleva 2 collaborations

Verónica Demicheli 2 collaborations

Florencia Tomasina 2 collaborations

Verónica Tórtora 2 collaborations

Dayana Benchoam 2 collaborations

Matías N Möller 2 collaborations

Aníbal M Reyes 2 collaborations

Matías R Machado 2 collaborations

Federico N Pedron 2 collaborations

Jonathan Chevriau 2 collaborations

Gabriela Soto 2 collaborations

Ana Denicola 2 collaborations

Javier Santos 2 collaborations

Laura Castro 2 collaborations

Lucio Aliperti Car 1 collaboration

Luciano Armentia 1 collaboration

Matías Blaustein 1 collaboration

Estefanía Piegari 1 collaboration

Camila Martínez Calejman 1 collaboration

Antonella Vila 1 collaboration

Analía Amante 1 collaboration

María Victoria Manese 1 collaboration

Laurence Abrami 1 collaboration

Mariela Veggetti 1 collaboration

David A Guertin 1 collaboration

F Gisou van der Goot 1 collaboration

María Martha Corvi 1 collaboration

Alejandro Colman-Lerner 1 collaboration

Analía Lima 1 collaboration

Carlos Batthyány 1 collaboration

Cecilia Chavarría 1 collaboration

Rodrigo Ivagnes 1 collaboration

María Dolores Piñeyro 1 collaboration

José M Souza 1 collaboration

Juan S Grassano 1 collaboration

María Inés De Armas 1 collaboration

Leonardo Darré 1 collaboration

Sergio Pantano 1 collaboration

Giuliana Cardozo 1 collaboration

Nicolás Viera 1 collaboration

J A Semelak 1 collaboration

F Battistini 1 collaboration

R Radi 1 collaboration

M Trujillo 1 collaboration

A Zeida 1 collaboration

D A Estrin 1 collaboration

Silvina Bartesaghi 1 collaboration

Maria Jose Valera 1 collaboration

Eduardo Boido 1 collaboration

Gemma Beltran 1 collaboration

María Jesús Torija 1 collaboration

Albert Mas 1 collaboration

Eduardo Dellacassa 1 collaboration

Francisco Carrau 1 collaboration

Florencia Scochera 1 collaboration

Roxana Toriano 1 collaboration

Sebastián F Villar 1 collaboration

Laura Corrales-González 1 collaboration

Belén Márquez de Los Santos 1 collaboration

Joaquín Dalla Rizza 1 collaboration

Lucia Turell 1 collaboration

Yunlong Shi 1 collaboration

Caitlin E Edwards 1 collaboration

Michael L Mallory 1 collaboration

Raymond J Pickles 1 collaboration

Ling Fu 1 collaboration

Keke Liu 1 collaboration

Jing Yang 1 collaboration

Ralph S Baric 1 collaboration

Richard C Boucher 1 collaboration

Kate S Carroll 1 collaboration

Bruno Manta 1 collaboration

Dario Estrin 1 collaboration

Andresa Messias 1 collaboration

Adrián E Roitberg 1 collaboration

Nicolás O Foglia 1 collaboration

Cintia Jozefkowicz 1 collaboration

Nicolás Ayub 1 collaboration

Gerd Patrick Bienert 1 collaboration

Karina Edith Alleva 1 collaboration

Diego S Vazquez 1 collaboration

William A Agudelo 1 collaboration

Mónica R Montes 1 collaboration

Santiago Mansilla 1 collaboration

Florencia Pignataro 1 collaboration

Ignacio Castro 1 collaboration

Ma Laura Chiribao 1 collaboration

Carlos Robello 1 collaboration

Samuel L Freeman 1 collaboration

Vera Skafar 1 collaboration

Hanna Kwon 1 collaboration

Alistair J Fielding 1 collaboration

Peter C E Moody 1 collaboration

Alejandra Martínez 1 collaboration

Federico M Issoglio 1 collaboration

Lucas Inchausti 1 collaboration

Pablo Smircich 1 collaboration

Emma L Raven 1 collaboration

Jennyfer Martínez 1 collaboration

María Laura Chiribao 1 collaboration

Agustín Correa 1 collaboration

Celia Quijano 1 collaboration

Robert H Carnahan 1 collaboration

Paige Vinson 1 collaboration

Matt Goff 1 collaboration

Tracy Cooper 1 collaboration

W Hayes McDonald 1 collaboration

Natalie Castellana 1 collaboration

Luciana Hannibal 1 collaboration

Paul T Morse 1 collaboration

Junmei Wan 1 collaboration

Maik Hüttemann 1 collaboration

Ronald Jemmerson 1 collaboration